Transcriptomic Core
- Institution
- COLUMBIA UNIVERSITY HEALTH SCIENCES, NY
- Principal investigator
- Peter Alan Sims
- Funding
- $415K
- Duration
- 2010–2030
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Abstract
PROJECT SUMMARY The Single Cell Analysis and Bioinformatics Core will provide state-of-the-art experimental technology, computational biology, and biostatistical support tailored specifically to the program project. This includes scalable, pooled-sample methodology for single-cell RNA-seq (scRNA-seq) and multi-modal single-cell analysis technologies for multiplexed lineage tracing and surface protein profiling (CITE-seq). The Core will also provide comprehensive bioinformatics support including data processing and specialized tools for dimensionality reduction and automated annotation of single-cell data. Finally, we will assist Project investigators with experimental design and statistical modeling across a variety of modalities including single-cell genomics, mass spectrometry, and indirect calorimetry.
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